Whisk dry ingredients: In a medium bowl, whisk flour, baking soda, salt, ginger, cinnamon, cloves, and nutmeg until combined. Set aside.
Cream butter and sugar: In a large bowl, beat softened butter and dark brown sugar until light and fluffy, about 2–3 minutes.
Add molasses, egg, and vanilla: Beat in molasses, egg, and vanilla until smooth.
The mixture may look slightly curdled—that’s okay.
Combine: Add the dry ingredients to the wet and mix on low just until no dry streaks remain. Don’t overmix.
Chill the dough: Cover the bowl and chill for at least 1 hour, or up to 24 hours. Chilling prevents spreading and intensifies flavor.
Prep for rolling: Place granulated sugar in one shallow bowl and confectioners’ sugar in another.
Line two baking sheets with parchment.
Scoop and roll: Scoop 1–1.5 tablespoon portions (about 1-inch balls). Roll each ball first in granulated sugar, then generously in confectioners’ sugar, coating all sides.
Arrange on sheets: Set coated balls on prepared sheets, spacing about 2 inches apart.
Bake: Bake at 350°F (175°C) for 9–11 minutes. Edges should look set and the tops cracked, but centers still soft.
Cool: Let cookies rest on the sheet 5 minutes, then transfer to a rack to cool completely.
The crinkles will become more defined as they cool.